.. index:: single: NAMD .. _mdoc_namd: ===== NAMD_ ===== :download:`namd.sbatch` is a submission script that can be used to submit the :download:`apoa1.namd` calculation job to the queue. .. literalinclude:: namd.sbatch :language: bash The script can be submitted with this command:: sbatch namd.sbatch .. _NAMD: http://www.ks.uiuc.edu/Research/namd/