.. index::
	   single: midway2; trinity; 2.2
	   single: module; midway2/trinity/2.2

	.. _module_midway2_trinity_2.2:

-----------
trinity/2.2
-----------

	

name
    trinity

version
    2.2.0

description
    a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data

url
    https://github.com/trinityrnaseq/trinityrnaseq/wiki

license
    opensource

built
    Mon Oct 31 13:18:11 CDT 2016

dependencies
    :ref:`bowtie <_module_midway2_bowtie_1.1.2>`, :ref:`java <_module_midway2_java_1.8>`

tags
    :ref:`module_tag_genetics`, :ref:`module_tag_genetics and genomics`
	usage
	   Use the module system to load this version of trinity: ``module load midway2; module load trinity/2.2``

	After loading the module, use the command 'Trinity'

	.. seealso::

		:ref:`module_midway2_trinity_2.2` (default)
			All versions available for trinity.
	
		:ref:`modules`
			Full list of software modules available on Midway.

		:ref:`modules_tutorial`
			A tutorial on Midway modules and how to use them.